Sequence Similarity Clusters for the Entities in PDB 3VSF

Entity #1 | Chains: A,B,C,D,E,F
Ricin B lectin protein, length: 526 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 1386
95 % 1 5 1857 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 1 5 1898
70 % 1 5 1928
50 % 1 5 1950
40 % 1 5 1953
30 % 1 5 1883

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures