Sequence Similarity Clusters for the Entities in PDB 3VR6

Entity #1 | Chains: A,B,C
V-type sodium ATPase catalytic subunit A protein, length: 600 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 1711
95 % 2 8 2271
90 % 2 8 2338
70 % 2 8 2326
50 % 10 39 517
40 % 10 39 554
30 % 10 39 554
Entity #2 | Chains: D,E,F
V-type sodium ATPase subunit B protein, length: 465 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 1734
95 % 2 8 2289
90 % 2 8 2353
70 % 2 8 2340
50 % 7 24 716
40 % 7 24 753
30 % 7 24 743
Entity #3 | Chains: G
V-type sodium ATPase subunit D protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9985
95 % 3 7 10008
90 % 3 7 9884
70 % 3 7 9377
50 % 3 7 8528
40 % 3 7 7806
30 % 3 14 3158
Entity #4 | Chains: H
V-type sodium ATPase subunit G protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 10260
95 % 3 7 10267
90 % 3 7 10127
70 % 3 7 9597
50 % 3 7 8718
40 % 3 7 7983
30 % 3 7 7030

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.