Sequence Similarity Clusters for the Entities in PDB 3VR6

Entity #1 | Chains: A,B,C
V-type sodium ATPase catalytic subunit A protein, length: 600 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 2978
95 % 2 5 3714
90 % 2 5 3737
70 % 2 5 3684
50 % 10 33 655
40 % 10 33 694
30 % 10 33 692
Entity #2 | Chains: D,E,F
V-type sodium ATPase subunit B protein, length: 465 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 2995
95 % 2 5 3729
90 % 2 5 3752
70 % 2 5 3695
50 % 7 20 786
40 % 7 20 814
30 % 7 20 813
Entity #3 | Chains: G
V-type sodium ATPase subunit D protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 18335
95 % 3 4 16052
90 % 3 4 15689
70 % 3 4 14580
50 % 3 4 12770
40 % 3 4 11436
30 % 3 10 3687
Entity #4 | Chains: H
V-type sodium ATPase subunit G protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 20526
95 % 3 4 17641
90 % 3 4 17182
70 % 3 4 15884
50 % 3 4 13884
40 % 3 4 12430
30 % 3 4 10668

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.