Sequence Similarity Clusters for the Entities in PDB 3VR6

Entity #1 | Chains: A,B,C
V-type sodium ATPase catalytic subunit A protein, length: 600 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 1644
95 % 2 8 2194
90 % 2 8 2253
70 % 2 8 2248
50 % 10 38 514
40 % 10 38 549
30 % 10 38 549
Entity #2 | Chains: D,E,F
V-type sodium ATPase subunit B protein, length: 465 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 1670
95 % 2 8 2211
90 % 2 8 2267
70 % 2 8 2261
50 % 7 23 723
40 % 7 23 762
30 % 7 23 764
Entity #3 | Chains: G
V-type sodium ATPase subunit D protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9654
95 % 3 7 9664
90 % 3 7 9561
70 % 3 7 9086
50 % 3 7 8273
40 % 3 7 7580
30 % 3 13 3296
Entity #4 | Chains: H
V-type sodium ATPase subunit G protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9916
95 % 3 7 9913
90 % 3 7 9794
70 % 3 7 9295
50 % 3 7 8451
40 % 3 7 7748
30 % 3 7 6839

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.