Sequence Similarity Clusters for the Entities in PDB 3VR6

Entity #1 | Chains: A,B,C
V-type sodium ATPase catalytic subunit A protein, length: 600 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 1785
95 % 2 8 2350
90 % 2 8 2414
70 % 2 8 2401
50 % 10 42 492
40 % 10 42 529
30 % 10 42 532
Entity #2 | Chains: D,E,F
V-type sodium ATPase subunit B protein, length: 465 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 1808
95 % 2 8 2369
90 % 2 8 2430
70 % 2 8 2415
50 % 7 24 761
40 % 7 24 792
30 % 7 24 782
Entity #3 | Chains: G
V-type sodium ATPase subunit D protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 10298
95 % 3 7 10326
90 % 3 7 10205
70 % 3 7 9709
50 % 3 7 8811
40 % 3 7 8064
30 % 3 14 3233
Entity #4 | Chains: H
V-type sodium ATPase subunit G protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 10584
95 % 3 7 10598
90 % 3 7 10462
70 % 3 7 9953
50 % 3 7 9014
40 % 3 7 8253
30 % 3 7 7270

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.