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Crystal structure of Enterococcus hirae V1-ATPase [eV1]
Sequence Clustering and Redundancy Reduction Results
3VR4
Sequence Clusters for the Sequence Entities in PDB 3VR4
Entity #1: Chains: A,B,C - V-type sodium ATPase catalytic subunit A protein, length: 600 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 5 2783
95% 1 5 3469
90% 1 5 3501
70% 1 5 3462
50% 1 28 717
40% 1 28 743
30% 1 28 740
Entity #2: Chains: D,E,F - V-type sodium ATPase subunit B protein, length: 465 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 5 2799
95% 1 5 3484
90% 1 5 3517
70% 1 5 3474
50% 5 18 844
40% 5 18 867
30% 5 18 861
Entity #3: Chains: G - V-type sodium ATPase subunit D protein, length: 217 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 17082
95% 2 4 15022
90% 2 4 14679
70% 2 4 13675
50% 2 4 11996
40% 2 4 10762
30% 2 8 4057
Entity #4: Chains: H - V-type sodium ATPase subunit G protein, length: 115 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 19129
95% 2 4 16522
90% 2 4 16086
70% 2 4 14915
50% 2 4 13059
40% 2 4 11713
30% 2 4 10078
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.