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Crystal structure of Enterococcus hirae V1-ATPase [eV1]
Sequence Clustering and Redundancy Reduction Results
3VR4
Sequence Clusters for the Sequence Entities in PDB 3VR4
Entity #1: Chains: A,B,C - V-type sodium ATPase catalytic subunit A protein, length: 600 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 5 2611
95% 1 5 3259
90% 1 5 3287
70% 1 5 3265
50% 1 25 808
40% 1 25 829
30% 1 25 833
Entity #2: Chains: D,E,F - V-type sodium ATPase subunit B protein, length: 465 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 5 2626
95% 1 5 3274
90% 1 5 3303
70% 1 5 3277
50% 5 18 794
40% 5 18 812
30% 5 18 815
Entity #3: Chains: G - V-type sodium ATPase subunit D protein, length: 217 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 16223
95% 2 4 14294
90% 2 4 13984
70% 2 4 13040
50% 2 4 11440
40% 2 4 10266
30% 2 8 3873
Entity #4: Chains: H - V-type sodium ATPase subunit G protein, length: 115 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 18195
95% 2 4 15738
90% 2 4 15340
70% 2 4 14224
50% 2 4 12450
40% 2 4 11169
30% 2 4 9626
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.