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Crystal structure of Enterococcus hirae V1-ATPase [eV1]
Sequence Clustering and Redundancy Reduction Results
3VR4
Sequence Clusters for the Sequence Entities in PDB 3VR4
Entity #1: Chains: A,B,C - V-type sodium ATPase catalytic subunit A protein, length: 600 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 5 2423
95% 1 5 3032
90% 1 5 3070
70% 1 5 3072
50% 1 25 732
40% 1 25 746
30% 1 25 754
Entity #2: Chains: D,E,F - V-type sodium ATPase subunit B protein, length: 465 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 5 2437
95% 1 5 3050
90% 1 5 3089
70% 1 5 3087
50% 5 18 719
40% 5 18 732
30% 5 18 737
Entity #3: Chains: G - V-type sodium ATPase subunit D protein, length: 217 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 15517
95% 2 4 13745
90% 2 4 13455
70% 2 4 12563
50% 2 4 11039
40% 2 4 9905
30% 2 8 3742
Entity #4: Chains: H - V-type sodium ATPase subunit G protein, length: 115 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 17439
95% 2 4 15144
90% 2 4 14775
70% 2 4 13721
50% 2 4 12028
40% 2 4 10787
30% 2 4 9331
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.