Sequence Similarity Clusters for the Entities in PDB 3VQZ

Entity #1 | Chains: A
Metallo-beta-lactamase protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 12105
95 % 6 7 11673 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 6 7 11501
70 % 6 7 10887
50 % 8 9 6874
40 % 32 34 1185
30 % 43 46 845

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5NGG 1 A, B Blr6230 protein 1355477
2 5WCM 1 A, B Blr6230 protein residues 32-294 1355477
3 5NJW 1 A, B Blr6230 protein 1355477
4 4AX1 1 B METALLO-BETA-LACTAMASE AIM-1 287
5 5B15 1 A Metallo-beta-lactamase 615 3.5.2.6 | Details
6 5AXO 1 A Metallo-beta-lactamase UNP residues 19-280 615 3.5.2.6 | Details
7 3LVZ 1 A, B Blr6230 protein 1355477
8 2GMN 1 A, B Metallo-beta-lactamase residues 21-294 1355477 3.5.2.6 | Details
9 5B1U 1 A Metallo-beta-lactamase 615 3.5.2.6 | Details
10 4AWY 1 B METALLO-BETA-LACTAMASE AIM-1 287
11 5WCK 1 A, B FEZ-1 protein residues 20-282 464 3.5.2.6 | Details
12 3VPE 1 A Metallo-beta-lactamase UNP residues 19-280 615 3.5.2.6 | Details
13 5EVK 1 A Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
14 4AX0 1 B METALLO-BETA-LACTAMASE AIM-1 287
15 5W90 1 A FEZ-1 protein residues 21-282 464 3.5.2.6 | Details
16 1K07 1 A, B FEZ-1 beta-lactamase RESIDUES 20-282 464 3.5.2.6 | Details
17 2AIO 1 A Metallo-beta-lactamase L1 residues 22-290 40324 3.5.2.6 | Details
18 4AWZ 1 A, B, C METALLO-BETA-LACTAMASE AIM-1 287
19 1SML 1 A PROTEIN (PENICILLINASE) 40324 3.5.2.6 | Details
20 6E0S 1 A MEM-A1 410658
21 2FU9 1 A, B Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
22 1JT1 1 A FEZ-1, class B3 metallo-beta-lactamase RESIDUES 20-282 464 3.5.2.6 | Details
23 2HB9 1 A Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
24 5HH6 1 A Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
25 2FU8 1 A, B Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
26 2FM6 1 A, B Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
27 2QIN 1 A, B, C, D Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
28 5EVB 1 A Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
29 5HH5 1 A Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
30 5EVD 1 A Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
31 2H6A 1 A, B Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
32 2FU7 1 A, B Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
33 5DPX 1 A, B Metallo-beta-lactamase L1 type 3 40324 3.5.2.6 | Details
34 5IQK 1 A, B beta-lactamase Rm3 77133 3.5.2.6 | Details
35 2GFJ 1 A, B Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
36 4P62 1 A Metallo-beta-lactamase AIM-1 287
37 2GFK 1 A, B Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
38 2QDT 1 A Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
39 2FU6 1 A, B Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
40 5AXR 1 A Metallo-beta-lactamase UNP residues 19-280 615 3.5.2.6 | Details
41 1L9Y 1 A, B FEZ-1 b-lactamase 464 3.5.2.6 | Details
42 5AEB 1 A, B LRA-12 UNP RESIDUES 26-293 506514 3.5.2.6 | Details
43 3VQZ 1 A Metallo-beta-lactamase UNP residues 19-280 615 3.5.2.6 | Details
44 5AYA 1 A Metallo-beta-lactamase UNP RESIDUES 19-280 615 3.5.2.6 | Details
45 2QJS 1 A, B, C, D Metallo-beta-lactamase L1 40324 3.5.2.6 | Details
46 5K0W 1 A, B Class B carbapenemase GOB-18 238