Sequence Similarity Clusters for the Entities in PDB 3VQY

Entity #1 | Chains: A
Pyrrolysine--tRNA ligase protein, length: 291 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 5610
95 % 25 28 1772 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.8
PDBFlex
90 % 25 28 1806
70 % 25 28 1829
50 % 25 28 1856
40 % 26 31 1494
30 % 26 31 1466

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.