Sequence Similarity Clusters for the Entities in PDB 3VQY

Entity #1 | Chains: A
Pyrrolysine--tRNA ligase protein, length: 291 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 17 2869
95 % 25 28 1905 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.8
PDBFlex
90 % 25 28 1938
70 % 25 28 1953
50 % 25 28 2012
40 % 26 31 1547
30 % 26 31 1549

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures