Sequence Similarity Clusters for the Entities in PDB 3VQG

Entity #1 | Chains: A
E3 ubiquitin-protein ligase LNX protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 49116
95 % 2 2 36610 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 2 34938
70 % 2 2 31027
50 % 2 2 26460
40 % 2 2 23327
30 % 37 308 111
Entity #2 | Chains: B
C-terminal peptide from Immunoglobulin superfamily member 5 protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures