Sequence Similarity Clusters for the Entities in PDB 3VQG

Entity #1 | Chains: A
E3 ubiquitin-protein ligase LNX protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 47503
95 % 2 2 35465 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 2 33887
70 % 2 2 30137
50 % 2 2 25742
40 % 2 2 22693
30 % 37 299 109
Entity #2 | Chains: B
C-terminal peptide from Immunoglobulin superfamily member 5 protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.