Sequence Similarity Clusters for the Entities in PDB 3VQF

Entity #1 | Chains: A
E3 ubiquitin-protein ligase LNX protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45837
95 % 1 2 34236 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 32748
70 % 1 2 29193
50 % 1 2 24984
40 % 1 2 22029
30 % 15 294 109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.