Sequence Similarity Clusters for the Entities in PDB 3VQF

Entity #1 | Chains: A
E3 ubiquitin-protein ligase LNX protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47737
95 % 1 2 35648 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 34042
70 % 1 2 30254
50 % 1 2 25836
40 % 1 2 22770
30 % 15 300 111

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures