Sequence Similarity Clusters for the Entities in PDB 3VQF

Entity #1 | Chains: A
E3 ubiquitin-protein ligase LNX protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47073
95 % 1 2 35154 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 33594
70 % 1 2 29891
50 % 1 2 25535
40 % 1 2 22513
30 % 15 297 109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.