Sequence Similarity Clusters for the Entities in PDB 3VQD

Entity #1 | Chains: A,B
POL polyprotein protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 15 1483
95 % 131 169 110 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 0.9
PDBFlex
90 % 131 169 115
70 % 131 169 128
50 % 131 170 152
40 % 132 173 163
30 % 132 173 173

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures