Sequence Similarity Clusters for the Entities in PDB 3VQB

Entity #1 | Chains: A,B
POL polyprotein protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 19 1251
95 % 142 170 114 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 142 170 117
70 % 142 170 134
50 % 142 171 158
40 % 143 174 168
30 % 144 175 185

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures