Sequence Similarity Clusters for the Entities in PDB 3VPD

Entity #1 | Chains: A,B
Ribosomal protein S6 modification protein protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36161
95 % 1 1 28236 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 3 11458
70 % 1 3 10822
50 % 1 3 9723
40 % 1 4 4114
30 % 3 7 2291

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.