Sequence Similarity Clusters for the Entities in PDB 3VPD

Entity #1 | Chains: A,B
Ribosomal protein S6 modification protein protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37270
95 % 1 1 29084 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 3 11829
70 % 1 3 11180
50 % 1 3 10018
40 % 1 4 4245
30 % 3 7 2365

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.