Sequence Similarity Clusters for the Entities in PDB 3VPB

Entity #1 | Chains: A,B,C,D
Putative acetylornithine deacetylase protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 7628
95 % 1 2 7950
90 % 1 2 7896
70 % 1 2 7596
50 % 1 2 6942
40 % 1 2 6435
30 % 1 6 3129
Entity #2 | Chains: E,F
Alpha-aminoadipate carrier protein lysW protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43663
95 % 1 1 32631
90 % 1 1 31248
70 % 1 1 27976
50 % 1 1 24036
40 % 1 1 21247
30 % 1 1 18032

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.