Sequence Similarity Clusters for the Entities in PDB 3VPB

Entity #1 | Chains: A,B,C,D
Putative acetylornithine deacetylase protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 7437
95 % 1 2 7760
90 % 1 2 7706
70 % 1 2 7417
50 % 1 2 6787
40 % 1 2 6292
30 % 1 6 3078
Entity #2 | Chains: E,F
Alpha-aminoadipate carrier protein lysW protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42790
95 % 1 1 32005
90 % 1 1 30649
70 % 1 1 27428
50 % 1 1 23591
40 % 1 1 20892
30 % 1 1 17730

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.