Sequence Similarity Clusters for the Entities in PDB 3VPB

Entity #1 | Chains: A,B,C,D
Putative acetylornithine deacetylase protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 8208
95 % 1 2 8488
90 % 1 2 8420
70 % 1 2 8092
50 % 1 2 7373
40 % 1 2 6797
30 % 1 7 2244
Entity #2 | Chains: E,F
Alpha-aminoadipate carrier protein lysW protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46441
95 % 1 1 34672
90 % 1 1 33176
70 % 1 1 29628
50 % 1 1 25420
40 % 1 1 22456
30 % 1 1 19058

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.