Sequence Similarity Clusters for the Entities in PDB 3VPB

Entity #1 | Chains: A,B,C,D
Putative acetylornithine deacetylase protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 7991
95 % 1 2 8276
90 % 1 2 8217
70 % 1 2 7905
50 % 1 2 7206
40 % 1 2 6649
30 % 1 7 2188
Entity #2 | Chains: E,F
Alpha-aminoadipate carrier protein lysW protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45316
95 % 1 1 33816
90 % 1 1 32370
70 % 1 1 28948
50 % 1 1 24845
40 % 1 1 21944
30 % 1 1 18602

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.