Sequence Similarity Clusters for the Entities in PDB 3VPB

Entity #1 | Chains: A,B,C,D
Putative acetylornithine deacetylase protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 8553
95 % 1 2 8858
90 % 1 2 8787
70 % 1 2 8451
50 % 1 2 7678
40 % 1 2 7072
30 % 1 7 2334
Entity #2 | Chains: E,F
Alpha-aminoadipate carrier protein lysW protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48187
95 % 1 1 36002
90 % 1 1 34401
70 % 1 1 30623
50 % 1 1 26207
40 % 1 1 23140
30 % 1 1 19636

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.