Sequence Similarity Clusters for the Entities in PDB 3VPB

Entity #1 | Chains: A,B,C,D
Putative acetylornithine deacetylase protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 8050
95 % 1 2 8331
90 % 1 2 8273
70 % 1 2 7950
50 % 1 2 7246
40 % 1 2 6682
30 % 1 7 2197
Entity #2 | Chains: E,F
Alpha-aminoadipate carrier protein lysW protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45691
95 % 1 1 34134
90 % 1 1 32677
70 % 1 1 29207
50 % 1 1 25062
40 % 1 1 22137
30 % 1 1 18788

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.