Sequence Similarity Clusters for the Entities in PDB 3VND

Entity #1 | Chains: A,B,C,D,E,F,G,H
Tryptophan synthase alpha chain protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 8664
95 % 1 1 8969 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 8892
70 % 1 1 8552
50 % 63 68 678
40 % 81 93 321
30 % 82 95 326

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.