Sequence Similarity Clusters for the Entities in PDB 3VN0

Entity #1 | Chains: A,B,C,D
Voltage-gated hydrogen channel 1 protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25112
95 % 1 4 4375 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 1 4 4405
70 % 1 5 2244
50 % 1 5 2224
40 % 1 5 2219
30 % 1 5 2114

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures