Sequence Similarity Clusters for the Entities in PDB 3VMY

Entity #1 | Chains: A,B,C,D
Voltage-gated hydrogen channel 1 protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 5399
95 % 3 4 4180 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 3 4 4209
70 % 3 5 2146
50 % 3 5 2125
40 % 3 5 2116
30 % 3 5 2029

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.