Sequence Similarity Clusters for the Entities in PDB 3VMX

Entity #1 | Chains: A,B,C,D
Voltage-gated hydrogen channel 1 protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 5339
95 % 2 4 4145 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 2 4 4173
70 % 2 5 2120
50 % 2 5 2093
40 % 2 5 2086
30 % 2 5 2002

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.