Sequence Similarity Clusters for the Entities in PDB 3VHT

Entity #1 | Chains: A
Green fluorescent protein protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60253
95 % 226 252 65 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 239 292 36
70 % 243 297 28
50 % 244 298 76
40 % 254 311 88
30 % 435 522 17
Entity #2 | Chains: B
Green fluorescent protein,ATPase WRNIP1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58328
95 % 1 1 41490
90 % 1 1 39605
70 % 3 4 11346
50 % 3 4 10171
40 % 3 4 9250
30 % 3 4 8096
Entity #3 | Chains: C
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 142 321 4
95 % 176 396 5 Flexibility: Low
Max RMSD: 5.8, Avg RMSD: 1.1
PDBFlex
90 % 190 423 6
70 % 199 446 8
50 % 205 467 11
40 % 216 491 16
30 % 439 1044 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5TOG 1 A Polyubiquitin-B 9606
2 5NVG 1 A Polyubiquitin-B 9606
3 5TOF 1 A Polyubiquitin-B 9606
4 4XOF 1 A Ubiquitin 9606
5 3A9J 1 A Ubiquitin 10090
6 3A9J 2 B Ubiquitin 10090
7 5GOB 1 A Ubiquitin 9606
8 5GOB 2 B D-ubiquitin 9606
9 5W46 1 A, B Polyubiquitin-B 9606
10 5GOD 1 A, B Ubiquitin 9606
11 5GOD 2 C, D D-ubiquitin 9606
12 3NHE 2 B Ubiquitin 9606
13 5DK8 1 A, B Polyubiquitin-B Ubiquitin, UNP residues 2-75 9606
14 1YJ1 1 A, B, C Ubiquitin residues 1-76
15 5NL4 1 A, B, C Polyubiquitin-C 9606
16 5V1Y 2 C, D Ubiquitin 9606
17 4M0W 2 B Ubiquitin 9913
18 4Y1H 1 A Ubiquitin-40S ribosomal protein S27a K33 linked tri-Ubiquitin. 9913
19 2GBJ 1 A, B Ubiquitin 9606
20 1YIW 1 A, B, C Ubiquitin 9031
21 1OGW 1 A UBIQUITIN LEF IS (4S)-5-FLUORO-L-LEUCINE RESIDUES 1-76 9606
22 2WWZ 1 A, B UBIQUITIN 9913
23 5KYC 2 C Polyubiquitin-B UNP residues 1-76 9606
24 4IUM 2 B Ubiquitin UNP residues 1-75 9606
25 3A9K 1 A Ubiquitin 10090
26 3A9K 2 B Ubiquitin 10090
27 4HK2 1 A, B, C, D Ubiquitin 9606
28 5KYF 2 C Polyubiquitin-B UNP residues 1-76 9606
29 1XD3 2 B, D UBC protein 9606
30 5NLF 1 A, B, C Polyubiquitin-C 9606
31 4ZPZ 1 A, B Polyubiquitin-B ubiquitin, UNP residues 1-73 9606
32 4UN2 1 A UBIQUITIN 9606
33 5VBT 1 A, B UBH04 32630
34 4PIH 1 A, B Ubiquitin 9606
35 2ZCC 1 A, B, C Ubiquitin 9913
36 4PIJ 1 A, B Ubiquitin 9606
37 5NLI 1 A, B, C Polyubiquitin-C 9606
38 4V3L 2 B, D POLYUBIQUITIN-C G76 IN CHAIN B IS COVALENTLY LINKED TO K85 SIDE CHAIN IN CHAIN A. RESIDUES 77-152 9606
39 4LJO 2 B Polyubiquitin-C unp residues 77-152 9913
40 3BY4 2 B Ubiquitin 9606
41 5K9P 1 A Polyubiquitin-B 9606
42 5NLJ 1 A, B, C Polyubiquitin-B 9606
43 5KYD 1 D Polyubiquitin-B UNP residues 1-76 9606
44 4XYZ 1 A, B Polyubiquitin-C UNP residues 77-152 9913
45 3M3J 1 A, B, C, D, E, F Ubiquitin 9913
46 2ZNV 2 B, E Ubiquitin 10090
47 2ZNV 3 C, F Ubiquitin 10090
48 2GBM 1 A, B, C, D Ubiquitin 9606
49 5OXH 1 A Ubiquitin T66V/L67N mutant 9606
50 5EMZ 1 A, C, E Polyubiquitin-B 9606
51 5EMZ 2 B, D, F Polyubiquitin-B 9606
52 3VUX 1 A, B, C Polyubiquitin-C Ubiquitin 9606
53 2GBN 1 A Ubiquitin 9606
54 2ZCB 1 A, B, C Ubiquitin 9606
55 5OXI 1 A, B Ubiquitin L67S mutant 9606
56 4K1R 2 B, D Polyubiquitin-C 9606
57 3PRP 2 B, D Ubiquitin 9606 3.4.19.12 | Details
58 4I6N 2 B, D Ubiquitin 9606
59 3V6C 2 B Ubiquitin 9606
60 5AF5 1 A POLYUBIQUITIN-C 9606
61 5J8P 1 A ubiquitin 9606
62 5J8P 2 B D-ubiquitin 9606
63 4K7U 1 A, B, C ubiquitin UNP residues 1-76 9606 6.3.2.19 | Details
64 2J7Q 2 B, D UBIQUITIN THE C-TERMINAL GLY 76 IS REPLACED BY THE VINYLMETHYLESTER MOIETY UBIQUITIN FUSED TO VINYLMETHYLESTER, UBVME, RESIDUES 1-75 9606
65 3NS8 1 A, B Ubiquitin 9606
66 5GOJ 1 A Ubiquitin 9606
67 5GOJ 2 B D-ubiquitin 9606
68 1UBI 1 A UBIQUITIN 9606
69 2D3G 1 A, B ubiquitin 9913
70 5GOC 1 A Ubiquitin 9606
71 5GOC 2 D D-ubiquitin 9606
72 5X3N 1 A Polyubiquitin-B UNP residues 1-76 9606
73 1UBQ 1 A UBIQUITIN 9606
74 4ZFR 2 B ubiquitin unp residues 77-152 9606
75 4MSM 2 B, D Ubiquitin UNP residues 77-152 9606
76 4HJK 1 A Ubiquitin UNP residues 87-162 9606
77 3N32 1 A Ubiquitin 9606
78 5L8H 2 B Polyubiquitin-B Recombinant expression followed by chemical synthesis. 9606
79 3ONS 1 A Ubiquitin 9606
80 3MHS 4 D Ubiquitin 9606
81 5M93 1 A, B, C Polyubiquitin-B 9606
82 4K7W 1 A, B, C ubiquitin UNP residues 1-76 9606 6.3.2.19 | Details
83 2HD5 2 B Polyubiquitin residues 1-76 9913
84 5NMC 1 A, B, C Polyubiquitin-C 9606
85 5GOI 1 A, B Ubiquitin 9606
86 5GOI 2 C, D D-ubiquitin 9606
87 1WRD 2 B Ubiquitin 9913
88 5GVI 2 B ubiquitin 10090
89 5GVI 3 C ubiquitin 10090
90 4K7S 1 A, B, C ubiquitin UNP residues 1-73 9606 6.3.2.19 | Details
91 5CVM 2 B Polyubiquitin-B UNP residues 1-76 9606
92 2FCS 1 A, B Ubiquitin residues 1-76
93 4Q5E 2 B Polyubiquitin 4932 6.3.2.19 | Details
94 5V1Z 2 C, D Ubiquitin 9606
95 3ALB 1 A, B, C, D ubiquitin 9606
96 5D0M 3 B Polyubiquitin-B UNP residues 1-76 9606
97 4PIG 1 A, B, C, D Ubiquitin 9606
98 5X3M 1 A Polyubiquitin-B 9606
99 5X3M 2 D D-ubiquitin D-Ub-S65E-NH2 9606
100 5NL5 1 A, B, C Polyubiquitin-B 9606
101 4MSQ 2 B, D Ubiquitin UNP residues 77-152 9606
102 4LDT 2 B Ubiquitin aldehyde 9606
103 4LDT 4 D Ubiquitin 9606
104 3VUW 1 A, B, C Polyubiquitin-C Ubiquitin 9606
105 3TMP 2 B, D, F, H Polyubiquitin-C Ubiquitin-like 1 9606
106 2QHO 1 A, C, E, G Ubiquitin 9913
107 3H7P 1 A Ubiquitin 9606
108 3H7P 2 B Ubiquitin 9606
109 4WZP 1 A, B, C, D, E, F, G, H ubiquitin phosphorylation at Ser65 UNP residues 1-76 9606
110 3EHV 1 A, B, C Ubiquitin 9606 6.3.2.19 | Details
111 5GO7 1 A Ubiquitin 9606
112 5GO7 2 B D-ubiquitin 9606
113 1P3Q 2 U, V Ubiquitin 9913
114 2OOB 2 B Ubiquitin 9913
115 5ULF 2 B, D Ubiquitin 9606
116 5KYE 2 C, D Polyubiquitin-B UNP residues 1-76 9606
117 5ULH 2 B Ubiquitin 9606
118 3HM3 1 A, B, C, D Ubiquitin 9606
119 5LRW 2 B, D Polyubiquitin-B Gly76 was replaced with 2-bromoethylamine 9606
120 5GOK 1 A Ubiquitin 9606
121 5GOK 2 B D-ubiquitin 9606
122 4WLR 3 C Polyubiquitin-B 9606
123 3WWQ 1 A, D, G, J Ubiquitin 10090
124 3WWQ 2 B, E, H, K Ubiquitin 10090
125 3EFU 1 A Ubiquitin 9606
126 4Q5H 2 B Polyubiquitin 4932 6.3.2.19 | Details
127 5AF4 1 A, B, C, D, E, F, G, H UBIQUITIN ISOPEPTIDE LINKAGES BETWEEN A76 C AND B33 NZ, C76 C AND D33 NZ, E76 C AND F33 NZ 9606
128 4V3K 2 B, E POLYUBIQUITIN-C LYS85 IN CHAINS A AND D IS COVALENTLY LINKED TO GLY76 IN CHAINS B AND E, RESPECTIVELY. RESIDUES 77-152 9606
129 4IG7 2 B Ubiquitin 9606
130 2JF5 1 A, B UBIQUITIN ISO-PEPTIDE LINK BETWEEN A-LYS63 AND B-GLY76 9606
131 5MN9 1 A, B Ubiquitin-40S ribosomal protein S27a 9913
132 5WVO 1 A, B Ubiquitin 9606
133 3V6E 2 B Ubiquitin 9606
134 1UZX 2 B UBIQUITIN 9913
135 1S1Q 2 B, D ubiquitin 9606
136 4LJP 2 B Polyubiquitin-C unp residues 77-152 9913
137 3VUY 1 A, B, C Polyubiquitin-C Ubiquitin 9606
138 3PHW 2 B, D, F, H Ubiquitin-40S ribosomal protein S27a UNP residues 1-75 9606
139 4PQT 2 B Protein UBBP4 unp residues 77-152 9606
140 5BZ0 2 B Ubiquitin-40S ribosomal protein S27a Ubiquitin from bovine erythrocytes 9913
141 2GBR 1 A, B, C Ubiquitin 9606
142 4XKL 1 A, C Ubiquitin 9606
143 4FJV 2 B, D Polyubiquitin-C 9606
144 5DFL 1 B Ubiquitin 9606
145 2C7N 2 B, D, F, H, J, L UBIQUITIN 9913
146 5GOH 1 A Ubiquitin 9606
147 5GOH 2 D D-ubiquitin 9606
148 3ZNI 4 D, H, L, P POLYUBIQUITIN-C CARBONYL CARBON OF G76 IN CHIANS D, H, L AND P FORMS AN ISOPEPTIDE LINKAGE WITH THE SIDECHAIN OF K85 IN CHAINS C, G, K AND O, RESPECTIVELY. GSGGS LINKER AT THE N- TERMINUS OF PROTEIN RESULTED FROM CLONING RESIDUES 77-152 9606
149 2G45 2 B, E Ubiquitin 9606
150 5MNJ 2 B, F Polyubiquitin-B gsggs linker at the N-terminus resulted from cloning. G76 in chain B is covalently linked to K85 side chain in Chain A. 9606
151 4RF1 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-75 9606
152 5JBY 1 A, C, E ubiquitin 9606
153 5JBY 2 B, D, F D-ubiquitin 9606
154 5IFR 2 B Polyubiquitin-B 9606
155 2IBI 2 B Ubiquitin 9606
156 5L6H 2 B, D, E Ubiquitin-40S ribosomal protein S31 4932
157 5GOG 1 A Ubiquitin 9606
158 5GOG 2 B D-ubiquitin 9606
159 2GBK 1 A, B, C, D Ubiquitin 9606
160 4AUQ 3 C, F POLYUBIQUITIN-C UBIQUITIN, RESIDUES 1-76 9606
161 4NNJ 2 B, D, E Uba1 UNP residues 1-76 4932
162 4Z9S 1 A, B, C, D Ubiquitin-40S ribosomal protein S27a UNP RESIDUES 1-76 9913
163 2XEW 1 A, B, C, D, E, F, G, H, I, J, K, L UBIQUITIN UBIQUITIN POLYMER LINKED THROUGH LYS11 IN AN ISOPEPTIDE LINKAGE 9606
164 2WDT 2 B, D UBIQUITIN C-TERMINAL GLY76 OF WILDTYPE UBIQUITIN IS REPLACED BY A VINYL METHYLESTER MOIETY (UBVME) RESIDUES 1-75 9606
165 1AAR 1 A, B DI-UBIQUITIN 9913
166 4AP4 3 C, F UBIQUITIN C ISOPEPTIDE AMIDE LINKED TO UBCH5A (CHAIN B AND CHAIN E) RESIDUES 76-152 9606
167 4UEL 2 B POLYUBIQUITIN-B GLY76 OF UBIQUITIN IS REPLACED BY GLY-AYE THAT IS COVALENTLY LINKED TO THE ACTIVE SITE CYS88 OF UCH-L5 9606
168 4II2 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 4896
169 4ZFT 2 B, D Polyubiquitin-B unp residues 77-152 9606
170 2WX0 1 A, B, E, F UBIQUITIN 9913
171 3A1Q 1 A, D Ubiquitin 10090
172 3A1Q 2 B, E Ubiquitin 10090
173 5HPL 2 C, D Ubiquitin variant R5.4 9606
174 5TR4 2 B, D Ubiquitin 9913
175 4BOS 2 C, E POLYUBIQUITIN-C RESIDUES 1-76 9606
176 3H7S 1 A, B Ubiquitin 9606
177 3C0R 2 B, D Ubiquitin 9606
178 5AIU 3 C, F POLYUBIQUITIN-C CHAIN B COVALENTLY LINKED TO CHAINS C, CHAIN E IS COVALENTLY LINKED TO CHAIN F UNP RESIDUES 1-76 9606
179 4S22 1 A, B, C, D Ubiquitin residues 77-152 9913
180 2C7M 2 B UBIQUITIN 9913
181 1TBE 1 A, B TETRAUBIQUITIN 9606
182 3PT2 2 B Ubiquitin B 9606
183 5VZW 2 C, D Ubiquitin 9606
184 3PRM 2 B, D Ubiquitin 9606 3.4.19.12 | Details
185 4R62 2 B Ubiquitin-40S ribosomal protein S27a Ubiquitin 9606
186 5EYA 3 C, D Polyubiquitin-B UNP residues 1-76 9606
187 5GO8 1 A ubiquitin 9606
188 5GO8 2 B D-ubiquitin 9606
189 3A33 2 B Ubiquitin 9606
190 3VHT 3 C Ubiquitin 10090
191 2FCN 1 A, B Ubiquitin residues 1-76
192 4DHJ 2 B, F, J, M Ubiquitin aldehyde 9606
193 4DHJ 3 D, H Ubiquitin 9606
194 3ZNH 2 B POLYUBIQUITIN-B GLY76 IS REPLACED WITH A PROPARGYL GROUP 9606
195 4BBN 2 C POLYUBIQUITIN-B RESIDUES 1-76 9913
196 4BBN 3 F POLYUBIQUITIN-B RESIDUES 229-304 9913
197 4NQL 2 B Ubiquitin 10090
198 4NQL 3 C Ubiquitin 10090
199 1NBF 2 C, D Ubiquitin aldehyde 9606
200 2O6V 1 A, C, E, G Ubiquitin 9606
201 2O6V 2 B, F Ubiquitin 9606
202 2O6V 3 D, H Ubiquitin 9606
203 3OFI 2 C, D Ubiquitin 9606
204 3AUL 1 A, B Polyubiquitin-C Ubiquitin 9606
205 3UGB 2 B Polyubiquitin-C unp residues 1-76 9606
206 5JBV 1 A Ubiquitin 9606
207 5JBV 2 B D-ubiquitin 9606
208 5X3O 1 A Polyubiquitin-B UNP residues 1-76 9606
209 5X3O 2 D D-ubiquitin 9606
210 5ULK 2 B Ubiquitin 9606
211 3NOB 1 A, B, C, D, E, F, G, H Ubiquitin 9606
212 3IFW 2 B Ubiquitin 9606
213 2FCM 1 A, B Ubiquitin residues 1-76
214 4KSK 2 C, D Polyubiquitin-C unp residues 76-152 9606
215 5L6J 2 B, D Ubiquitin-40S ribosomal protein S31 4932
216 5OHL 2 I, J, K, L, M, N, O, P Polyubiquitin-B 9606
217 3I3T 2 B, D, F, H Ubiquitin 9606
218 5FER 3 C, F Ubiquitin-40S ribosomal protein S27a 9913
219 5OHK 2 B Polyubiquitin-B 9606
220 1CMX 2 B, D PROTEIN (UBIQUITIN YUH1-UBAL) UBIQUITIN C-TERMINUS MODIFIED TO AN ALDEHYDE ALL 9606 3.1.2.15 | Details
221 3OJ3 1 A, B, C, D, E, F, G, H Ubiquitin Ubiquitin, UNP residues 1-76 9606
222 5N38 2 B Polyubiquitin-B Ser65 is phosphorylated 9606
223 3O65 2 B, D, F, H Ubiquitin 9606
224 5CRA 2 C, D Polyubiquitin-B UNP residues 1-75 9606
225 5U4P 3 C Ubiquitin-40S ribosomal protein S31 4932
226 5L6I 2 B, D, E Ubiquitin-40S ribosomal protein S31 4932
227 5XPK 1 A Ubiquitin 9606
228 5XPK 2 B D-ubiquitin 9606
229 5XDP 1 B D-ubiquitin 9606
230 5XDP 2 A ubiquitin-B K11/48-branched teraubiquitin 9606
231 5D0K 3 B, E, H, K Polyubiquitin-B UNP residues 1-76 9606
232 5OHV 1 A, C Ubiquitin 9606
233 5KNL 2 B, E Ubiquitin 84753
234 4I6L 2 B Ubiquitin UNP residues 77-150 9606
235 5TUT 2 B Ubiquitin 9606
236 3OLM 2 D Ubiquitin 4932
237 3CMM 2 B, D Ubiquitin 559292
238 4MDK 2 E, F, G, H Ubiquitin UNP residues 76-152 9606
239 5N2W 2 B Polyubiquitin-B Ser65 is phosphorylated to give SEP65 9606
240 4MM3 1 A Ubiquitin UNP residues 1-76 9606
241 2FIF 1 A, C, E Ubiquitin 9913
242 5JQS 2 D Ubiquitin-40S ribosomal protein S27a 9913
243 2XBB 2 C, D UBIQUITIN 9913
244 2GMI 3 C Ubiquitin 9606
245 4HCN 2 B Polyubiquitin unp RESIDUES 1-76 4932
246 5J26 1 B Ubiquitin Variant i53 9606
247 3DVG 3 X Ubiquitin D77 9606
248 3DVG 4 Y Ubiquitin 9606
249 1WR6 2 E, F, G, H ubiquitin 9913
250 3LDZ 1 E, F, G Ubiquitin 9913
251 3PTF 2 C, D Polyubiquitin-B Ubiquitin 9606
252 3RUL 1 A, B, C, D Ubiquitin 9606
253 5BNB 2 E, F, G, I Polyubiquitin-B 9606
254 5LRX 2 B, D Polyubiquitin-B Gly76 was replaced with propargylamide 9606
255 5CAW 2 B, D Polyubiquitin-B phosphorylated at Ser65 Gly76 exchanged with chemical probe, bromopropylamine. The bromide was lost during the coupling. 9606
256 4XOK 1 A, B, C Ubiquitin 9606
257 3MTN 2 B, D UBIQUITIN VARIANT UBV.21.4 9606
258 5LRV 2 B Polyubiquitin-B Lys11 was replaced with a diaminobutyric acid (DAB) residue 9606
259 5LRV 3 C Polyubiquitin-B Gly76 was replaced with a ligation handle for diubiquitin probe generation 9606
260 3DVN 3 U, X Ubiquitin D77 9606
261 3DVN 4 V, Y Ubiquitin 9606
262 5L8W 3 C Polyubiquitin-B Recombinant expression followed by chemical synthesis 9606
263 1F9J 1 A, B TETRAUBIQUITIN 9606
264 2FID 1 A Ubiquitin 9913
265 5OHP 2 B, C Polyubiquitin-B 9606
266 4HXD 1 A, C Polyubiquitin-C 9606 3.4.19.12 | Details
267 1YD8 1 U, V UBIQUIN 9913
268 4BOZ 2 B, C, E UBIQUITIN-C 9606
269 3WXG 2 B, E Ubiquitin 10090
270 3WXG 3 C, F Ubiquitin UNP residues 1-72 10090
271 4XKH 1 A, B, D, F, G, I Polyubiquitin-C UNP RESIDUES 77-152 9913
272 3IHP 2 C, D Ubiquitin 9606
273 5LN1 2 U Polyubiquitin-B 9606
274 3K9P 2 B Ubiquitin 9606
275 4BVU 3 C UBIQUITIN OXYESTER LINK BETWEEN G76 AND UBCH5C S85 9606
276 5CVN 3 D Polyubiquitin-B UNP residues 1-76 9606
277 3JSV 1 A Ubiquitin 9606
278 3JSV 2 B Ubiquitin 9606
279 3TBL 2 D, E Ubiquitin 9606
280 2HTH 1 A Ubiquitin 9606
281 3KW5 2 B Ubiquitin 9606
282 6EQI 1 A Ubiquitin 9606
283 5E6J 2 B, E ubiquitin 32630
284 5E6J 3 C, F Polyubiquitin-B 32630
285 2XK5 1 A UBIQUITIN 9606
286 2XK5 2 B UBIQUITIN 9606
287 4JQW 2 C Polyubiquitin-C Ubiquitin 9606
288 4RF0 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-75 9606
289 3KVF 2 B Ubiquitin 9606
290 5AF6 1 A, B, C, D, E UBIQUITIN ISOPEPTIDE BONDS ACROSS BETWEEN CHAINS, A76 C AND D33 NZ, B76 C AND A33 NZ, C76C AND B33 NZ, E76 C AND C33 NZ. ISOPEPTIDE BOND ACROSS THE ASU FOR, D76 C AND E33 NZ SYMM 9606
291 3H1U 1 A, B Ubiquitin 9913
292 5JTJ 2 B Polyubiquitin-B 9606
293 2WX1 1 A, B UBIQUITIN 9913
294 4WUR 2 B Polyubiquitin-B UNP residues 1-76 9606
295 4II3 2 B, D Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 4896
296 4S1Z 1 A, B, C, D, E Ubiquitin residues 1-76 9606
297 4XOL 1 A, B Ubiquitin 9606
298 5JP3 2 B, D, F, H Polyubiquitin-B 9606
299 4P4H 3 S, T, U, W, X Ubiquitin-60S ribosomal protein L40 9606
300 5O44 1 A, E Ubiquitin 7370
301 5O44 2 B, C Polyubiquitin-B 9606
302 5O44 3 D, F Polyubiquitin-B 9606
303 3PHD 2 E, F, G, H Polyubiquitin 9606
304 3N30 1 A, B Ubiquitin 9606
305 3ZLZ 1 A, B UBIQUITIN TRI-UBIQUITIN CHAIN LINKED VIA LYS6. K48R IN BOTH MOLECULES. ISOPEPTIDE LINKAGES ARE NOT RESOLVED. 9606
306 3JVZ 3 X, Y Ubiquitin 9606
307 4DHZ 2 B Ubiquitin aldehyde 9606
308 4DHZ 3 E Ubiquitin 9606
309 5UDH 3 E Ubiquitin C variant Hexa-his N-terminal tagged protein UNP residues 17-92 9606
310 5AIT 3 C, F POLYUBIQUITIN-C UNP RESIDUES 1-76 9913
311 3VFK 1 A ubiquitin, C-terminal fused by Cys-Lys-D-Ala-D-Ala 9606
312 3JW0 3 X, Y Ubiquitin 9606
313 4LCD 3 E, F Ubiquitin UNP residues 1-75 9606
314 4DDG 2 D, E, F, G, H, I, M, N, O, P, Q, R Polyubiquitin-C 9606
315 5JTV 2 B, D, F, H Polyubiquitin-B 9606
316 5OHN 2 B, D Polyubiquitin-B 9606
317 5TTE 3 F ubiquitin unp residues 1-76 4565
318 2FCQ 1 A, B Ubiquitin residues 1-76 9031
319 3EEC 1 A, B Ubiquitin 9606
320 5VNZ 3 C, F Ubiquitin 9606
321 4NQK 2 E, F, G, H, I, J Ubiquitin UNP residues 76-152 9606
322 4DDI 2 D, E, F, G, H, I Polyubiquitin-C 9606
323 5H7S 1 E, F Ubiquitin-like 1 9606
324 5EDV 3 E, F, G, H Polyubiquitin-B UNP residues 1-76 9606
325 5CVO 3 C, F Polyubiquitin-B UNP residues 1-76 9606
326 4UF6 2 B, E, H, K POLYUBIQUITIN-B GLY76 OF UBIQUITIN IS REPLACED BY GLY-AYE THAT IS COVALENTLY LINKED TO THE ACTIVE SITE CYS88 OF UCH- L5 9606
327 5OHM 1 A, C, E, G, I, K Polyubiquitin-C 9598
328 4ZUX 10 X, c, h, m Polyubiquitin-B 9606
329 2DX5 2 B Ubiquitin 9913
330 3OJ4 2 B, E Ubiquitin Ubiquitin, UNP residues 1-76 9606
331 5VO0 3 C, F Ubiquitin 9606
332 2AYO 2 B Ubiquitin 9606
333 5KHY 1 A Polyubiquitin-B 9606
334 5KHY 2 B Polyubiquitin-B 9606
335 4JIO 2 U Ubiquitin 9606
336 4WHV 3 A, F, G, L Polyubiquitin-B unp residues 1-76 9606
337 5XK4 1 A Polyubiquitin-B UNP residues 1-76 9606
338 5XK5 1 A Polyubiquitin-B UNP residues 1-76 9606
339 5VEY 2 B Polyubiquitin-B 9606
340 5VF0 1 A Polyubiquitin-B 9606
341 5XBO 1 A Polyubiquitin-B UNP residues 1-76 9606
342 5UJL 1 A, B Ubiquitin residues 1-76 9606
343 5GJQ 34 y Polyubiquitin-B UNP RESIDUES 1-76 9606
344 5KGF 8 M, O Ubiquitin 9606
345 2NBD 1 A entity 9606
346 2NBE 1 A entity 9606
347 5A5B 9 9 UBIQUITIN ALDEHYDE 9606
348 2N3U 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
349 2N3V 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
350 2N3W 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
351 2N2K 1 A ubiquitin 9606
352 2N2K 2 B ubiquitin 9606
353 2N13 2 B Ubiquitin 9606
354 2N13 3 C Ubiquitin 9606
355 2MWS 1 A Ubiquitin UNP residues 1-76 9606
356 2MUR 2 B Ubiquitin 9606
357 2MSG 1 A Ubiquitin UNP residuse 1-72 9606
358 2MRO 1 A Polyubiquitin-B Human Ubiquitin 9606
359 2MRE 1 A Polyubiquitin-C unp residues 1-76 9606
360 2MOR 1 A Ubiquitin UNP residues 1-76 9606
361 2MJB 1 A Ubiquitin-60S ribosomal protein L40 Ubiquitin-like 3 domain 9606
362 2MJ5 1 A Polyubiquitin-C UNP residuses 1-76 9606
363 2MI8 1 A Ubiquitin 9606
364 2RU6 1 A Ubiquitin 9606
365 2MCN 2 B Ubiquitin UNP residues 1-76 9606
366 2MBQ 1 A, B Ubiquitin UNP residues 1-76 9606
367 2MBO 1 A, B Ubiquitin UNP residues 1-76 9606
368 2MBH 2 A Ubiquitin 9606
369 2MBB 2 B Polyubiquitin-B UNP P0CG47 residues 1-76 9606
370 2M0X 1 A engineered ubiquitin variant 9606
371 2LZ6 1 A Ubiquitin 9606
372 2LVO 1 A Ubiquitin 9606
373 2LVP 1 A, B Ubiquitin 9606
374 2LVQ 1 A, B Ubiquitin 9606
375 2RSU 1 A Ubiquitin 9606
376 2LJ5 1 A Ubiquitin 9606
377 2LD9 1 A Ubiquitin 9606
378 2L3Z 1 A Ubiquitin UNP Residues 1-76 9606
379 2L0T 1 A Ubiquitin 9606
380 2L0F 1 A Ubiquitin 9606
381 2L00 2 B Ubiquitin ubiquitin core domain 4932
382 2RR9 1 A, B ubiquitin 9606
383 2KWV 2 B Ubiquitin 9606
384 2KWU 2 B Ubiquitin 9606
385 2KTF 1 A Ubiquitin 9606
386 2KOX 1 A Ubiquitin 9606
387 2KN5 1 A Ubiquitin 9606
388 2KLG 1 A Ubiquitin 9606
389 2KJH 2 B Ubiquitin 9606
390 2KHW 2 B Ubiquitin 9606
391 2KDE 2 B, C Ubiquitin 8355
392 2KDF 2 B, C Ubiquitin 9606
393 2K8B 1 A Ubiquitin 9606
394 2K8C 1 A Ubiquitin 9606
395 2K6D 2 B Ubiquitin ubiquitin 9606
396 2K39 1 A Ubiquitin 8355
397 2JZZ 1 A Ubiquitin 9606
398 2JY6 1 A Ubiquitin protein 9606
399 2JWZ 1 A Ubiquitin 4932
400 2JT4 2 B Ubiquitin SH3 domain sequence database residues 350-420 4932
401 2Z59 2 B Ubiquitin 9606
402 2JRI 2 B, C UBC protein sequence database residues 318-469 9606
403 2PE9 1 A, B Ubiquitin 9606
404 2PEA 1 A, B Ubiquitin 9606
405 2NR2 1 A Ubiquitin 9606
406 2G3Q 2 B Ubiquitin 4932
407 2DEN 2 B Ubiquitin 9606
408 2FUH 2 B Ubiquitin Ubiquitin 10116
409 1ZW7 1 A Ubiquitin 4932
410 1ZGU 2 B Ubiquitin 9606
411 2BGF 1 A, B DI-UBIQUITIN ISOPEPTIDE BOND BETWEEN GLY76A AND LYS48B 9606
412 1XQQ 1 A ubiquitin 9606
413 1WR1 1 A Ubiquitin 4932
414 1V80 1 A Ubiquitin/60s ribosomal protein L40 fusion 9913
415 1V81 1 A Ubiquitin/60s ribosomal protein L40 fusion 9913
416 1Q5W 2 B Ubiquitin 9606
417 1Q0W 2 B Ubiquitin 4932
418 1OTR 2 B Ubiquitin 4932
419 1G6J 1 A UBIQUITIN 9606
420 1FXT 2 B UBIQUITIN 9606
421 1D3Z 1 A PROTEIN (UBIQUITIN) 9606
422 1C3T 1 A PROTEIN (1D8 UBIQUITIN) 9606
423 1UD7 1 A PROTEIN (UBIQUITIN CORE MUTANT 1D7) 9606