Sequence Similarity Clusters for the Entities in PDB 3VHT

Entity #1 | Chains: A
Green fluorescent protein protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56224
95 % 206 227 70
90 % 218 264 37
70 % 221 268 47
50 % 222 269 81
40 % 223 270 100
30 % 406 483 16
Entity #2 | Chains: B
Green fluorescent protein, ATPase WRNIP1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54402
95 % 1 1 38682
90 % 1 1 37017
70 % 3 4 10497
50 % 3 4 9467
40 % 3 4 8605
30 % 3 4 7537
Entity #3 | Chains: C
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 128 286 6
95 % 151 344 7
90 % 161 366 6
70 % 167 382 8
50 % 173 403 12
40 % 184 425 18
30 % 382 929 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.