Sequence Similarity Clusters for the Entities in PDB 3VHM

Entity #1 | Chains: A,B,C,D
Avidin protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 1693
95 % 6 25 731 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.2
PDBFlex
90 % 7 26 718
70 % 18 39 384
50 % 21 43 433
40 % 21 43 461
30 % 162 201 83

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.