Sequence Similarity Clusters for the Entities in PDB 3VHM

Entity #1 | Chains: A,B,C,D
Avidin protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 1983
95 % 6 24 700
90 % 7 25 696
70 % 18 38 365
50 % 21 42 391
40 % 21 42 432
30 % 158 196 75

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.