Sequence Similarity Clusters for the Entities in PDB 3VHI

Entity #1 | Chains: A,B,C,D
Avidin protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 1736
95 % 3 25 738 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.2
PDBFlex
90 % 3 27 702
70 % 13 40 385
50 % 15 44 439
40 % 15 44 467
30 % 115 202 92

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.