Sequence Similarity Clusters for the Entities in PDB 3VFZ

Entity #1 | Chains: A,B
Probable RNA polymerase sigma-D factor protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14699
95 % 1 2 13780 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.2
PDBFlex
90 % 1 2 13538
70 % 1 2 12694
50 % 1 2 11290
40 % 1 2 10142
30 % 1 2 8646

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures