Sequence Similarity Clusters for the Entities in PDB 3VFK

Entity #1 | Chains: A
ubiquitin, C-terminal fused by Cys-Lys-D-Ala-D-Ala protein_D, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 212 291 6
95 % 258 354 5
90 % 277 379 6
70 % 293 399 8
50 % 307 420 11
40 % 320 443 15
30 % 580 954 9
Entity #2 | Chains: G
MonodeChloro- Teicoplanin A2-2 protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.