Sequence Similarity Clusters for the Entities in PDB 3VFJ

Entity #1 | Chains: A
Maltose-binding periplasmic protein, C-terminal fused by Cys-Lys-D-Ala-D-Ala protein, length: 378 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 29 63 341
95 % 44 115 213 Flexibility: Low
Max RMSD: 8.8, Avg RMSD: 2.1
PDBFlex
90 % 45 135 151
70 % 64 183 95
50 % 64 183 133
40 % 64 183 149
30 % 75 200 144
Entity #2 | Chains: G
MonodeChloro- Teicoplanin A2-2 protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures