Sequence Similarity Clusters for the Entities in PDB 3VEP

Entity #1 | Chains: C,G,J,X
Uncharacterized protein Rv3413c/MT3522 protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 21221
95 % 1 1 18187
90 % 1 1 17699
70 % 1 1 16357
50 % 1 1 14290
40 % 1 1 12808
30 % 1 1 10986
Entity #2 | Chains: A,D,E,H
Probable RNA polymerase sigma-D factor protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 12239
95 % 2 2 11725
90 % 2 2 11537
70 % 2 2 10851
50 % 2 2 9752
40 % 2 2 8880
30 % 2 2 7778

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.