Sequence Similarity Clusters for the Entities in PDB 3VEP

Entity #1 | Chains: C,G,J,X
Uncharacterized protein Rv3413c/MT3522 protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 23956
95 % 1 1 20450
90 % 1 1 19885
70 % 1 1 18263
50 % 1 1 15863
40 % 1 1 14157
30 % 1 1 12104
Entity #2 | Chains: A,D,E,H
Probable RNA polymerase sigma-D factor protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 13854
95 % 2 2 13161
90 % 2 2 12955
70 % 2 2 12206
50 % 2 2 10894
40 % 2 2 9886
30 % 2 2 8608

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.