Sequence Similarity Clusters for the Entities in PDB 3VEP

Entity #1 | Chains: C,G,J,X
Uncharacterized protein Rv3413c/MT3522 protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 20491
95 % 1 1 17603
90 % 1 1 17127
70 % 1 1 15827
50 % 1 1 13840
40 % 1 1 12402
30 % 1 1 10654
Entity #2 | Chains: A,D,E,H
Probable RNA polymerase sigma-D factor protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 11745
95 % 2 2 11276
90 % 2 2 11101
70 % 2 2 10460
50 % 2 2 9408
40 % 2 2 8569
30 % 2 2 7518

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.