POP-OUT | CLOSE

An Information Portal to 105906 Biological Macromolecular Structures

Crystal structure of SigD4 in complex with its negative regulator RsdA
Sequence Clustering and Redundancy Reduction Results
3VEP
Sequence Clusters for the Sequence Entities in PDB 3VEP
Entity #1: Chains: C,G,J,X - Uncharacterized protein Rv3413c/MT3522 protein, length: 80 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 18487
95% 1 1 15975
90% 1 1 15576
70% 1 1 14435
50% 1 1 12648
40% 1 1 11361
30% 1 1 9801
Entity #2: Chains: A,D,E,H - Probable RNA polymerase sigma-D factor protein, length: 86 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 10549
95% 2 2 10265
90% 2 2 10115
70% 2 2 9569
50% 2 2 8635
40% 2 2 7868
30% 2 2 6943
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.