Sequence Similarity Clusters for the Entities in PDB 3VEP

Entity #1 | Chains: C,G,J,X
Uncharacterized protein Rv3413c/MT3522 protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 21576
95 % 1 1 18458
90 % 1 1 17965
70 % 1 1 16607
50 % 1 1 14497
40 % 1 1 12977
30 % 1 1 11123
Entity #2 | Chains: A,D,E,H
Probable RNA polymerase sigma-D factor protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 12467
95 % 2 2 11929
90 % 2 2 11741
70 % 2 2 11042
50 % 2 2 9913
40 % 2 2 9009
30 % 2 2 7886

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.