Sequence Similarity Clusters for the Entities in PDB 3VEJ

Entity #1 | Chains: A,B
Ubiquitin-like protein MDY2 protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49351
95 % 1 1 36917 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 35246
70 % 1 1 31335
50 % 1 1 26802
40 % 1 1 23678
30 % 1 1 20131

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures