Sequence Similarity Clusters for the Entities in PDB 3VDN

Entity #1 | Chains: B
VldE protein, length: 497 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 2830
95 % 6 7 3541 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.5
PDBFlex
90 % 6 7 3589
70 % 6 7 3536
50 % 6 7 3443
40 % 6 7 3335
30 % 6 7 3109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.