Sequence Similarity Clusters for the Entities in PDB 3VDN

Entity #1 | Chains: B
VldE protein, length: 497 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 2959
95 % 6 7 3672 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.6
PDBFlex
90 % 6 7 3724
70 % 6 7 3672
50 % 6 7 3568
40 % 6 7 3442
30 % 6 7 3219

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.