Sequence Similarity Clusters for the Entities in PDB 3VD1

Entity #1 | Chains: A,B,C,D,I,J,K,L
Tumor protein p73 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 8 777
95 % 5 9 1007
90 % 5 9 1029
70 % 8 14 572
50 % 91 99 137
40 % 91 99 153
30 % 91 99 169
Entity #2 | Chains: E,F,G,H,M,N,O,P
DNA (5'-D(*CP*GP*GP*GP*CP*AP*TP*GP*CP*CP*CP*G)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.