Sequence Similarity Clusters for the Entities in PDB 3VD0

Entity #1 | Chains: A,B,C,D,I,J,K,L
Tumor protein p73 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 9 778
95 % 3 10 1035
90 % 3 10 1056
70 % 6 15 585
50 % 93 106 143
40 % 93 106 160
30 % 93 106 177
Entity #2 | Chains: E,F,G,H,M,N,O,P
DNA (5'-D(*CP*AP*GP*GP*CP*AP*TP*GP*CP*CP*TP*G)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.