Sequence Similarity Clusters for the Entities in PDB 3VD0

Entity #1 | Chains: A,B,C,D,I,J,K,L
Tumor protein p73 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 8 810
95 % 3 9 1049
90 % 3 9 1071
70 % 6 14 597
50 % 91 102 146
40 % 91 102 162
30 % 91 102 179
Entity #2 | Chains: E,F,G,H,M,N,O,P
DNA (5'-D(*CP*AP*GP*GP*CP*AP*TP*GP*CP*CP*TP*G)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.