Sequence Similarity Clusters for the Entities in PDB 3VAZ

Entity #1 | Chains: A,B,O,P,Q,R
Glyceraldehyde-3-phosphate dehydrogenase 1 protein, length: 344 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 1386
95 % 14 14 859 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 14 14 892
70 % 21 21 550
50 % 131 139 70
40 % 131 139 89
30 % 131 139 101

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.