Sequence Similarity Clusters for the Entities in PDB 3VAZ

Entity #1 | Chains: A,B,O,P,Q,R
Glyceraldehyde-3-phosphate dehydrogenase 1 protein, length: 344 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 1423
95 % 14 14 896 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 14 14 929
70 % 21 21 569
50 % 131 139 74
40 % 131 139 95
30 % 131 139 107

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures