Sequence Similarity Clusters for the Entities in PDB 3VAI

Entity #1 | Chains: A,B
Splicing factor U2AF 65 kDa subunit protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 11 1659
95 % 7 12 1909
90 % 7 12 1959
70 % 7 14 1830
50 % 7 14 1859
40 % 7 14 1876
30 % 7 14 1782
Entity #2 | Chains: E,P
DNA 5'-D(*UP*UP*(BRU)P*UP*CP*UP*U)-3' dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.