Sequence Similarity Clusters for the Entities in PDB 3VAE

Entity #1 | Chains: A,B
LD-transpeptidase type 2 protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 3216
95 % 12 13 2434 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.8
PDBFlex
90 % 12 13 2491
70 % 12 13 2482
50 % 12 13 2463
40 % 12 13 2428
30 % 12 13 2318

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.