Sequence Similarity Clusters for the Entities in PDB 3V9Z

Entity #1 | Chains: A,B
Ribonuclease T protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 11 1430
95 % 3 16 1130 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.8
PDBFlex
90 % 3 16 1156
70 % 3 16 1187
50 % 3 16 1243
40 % 3 16 1254
30 % 3 16 1229
Entity #2 | Chains: C,D
DNA (5'-D(*TP*TP*AP*CP*AP*CP*C)-3') dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.