Sequence Similarity Clusters for the Entities in PDB 3V5K

Entity #1 | Chains: A,D
HLA class I histocompatibility antigen, A-2 alpha chain protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 112 197 52
95 % 148 246 58
90 % 163 294 36
70 % 383 692 6
50 % 384 697 6
40 % 408 748 10
30 % 436 868 15
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 348 600 2
95 % 376 644 3
90 % 379 653 4
70 % 459 885 4
50 % 467 907 3
40 % 467 907 9
30 % 467 907 14
Entity #3 | Chains: C,F
HIV-based altered-peptide ligand KVAELVWFL protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.