Sequence Similarity Clusters for the Entities in PDB 3V5H

Entity #1 | Chains: A,D
HLA class I histocompatibility antigen, A-2 alpha chain protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 180 49
95 % 27 228 57
90 % 29 268 21
70 % 65 619 7
50 % 65 624 7
40 % 67 664 11
30 % 69 778 13
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 62 534 2
95 % 74 577 3
90 % 74 586 4
70 % 81 811 5
50 % 83 829 5
40 % 83 829 9
30 % 83 829 12
Entity #3 | Chains: C,F
HIV-based altered-peptide ligand KVAEIVHFL protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.