Sequence Similarity Clusters for the Entities in PDB 3V5H

Entity #1 | Chains: A,D
HLA class I histocompatibility antigen, A-2 alpha chain protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 195 50
95 % 27 244 55
90 % 29 284 33
70 % 67 649 7
50 % 67 654 7
40 % 69 701 11
30 % 72 817 14
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 65 568 2
95 % 77 611 3
90 % 77 620 4
70 % 84 847 5
50 % 86 867 4
40 % 86 867 9
30 % 86 867 13
Entity #3 | Chains: C,F
HIV-based altered-peptide ligand KVAEIVHFL protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.