Sequence Similarity Clusters for the Entities in PDB 3V5H

Entity #1 | Chains: A,D
HLA class I histocompatibility antigen, A-2 alpha chain protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 177 49
95 % 26 225 58
90 % 28 265 20
70 % 64 614 7
50 % 64 619 7
40 % 66 659 11
30 % 68 772 13
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 61 530 2
95 % 72 571 3
90 % 72 580 3
70 % 79 803 5
50 % 81 821 5
40 % 81 821 9
30 % 81 821 12
Entity #3 | Chains: C,F
HIV-based altered-peptide ligand KVAEIVHFL protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.