Sequence Similarity Clusters for the Entities in PDB 3V58

Entity #1 | Chains: A,C
Phycoerythrin alpha subunit protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21823
95 % 2 2 18830 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 2 18338
70 % 2 42 1289
50 % 2 9 1336
40 % 11 46 286
30 % 29 124 125
Entity #2 | Chains: B,D
Phycoerythrin beta subunit protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21550
95 % 2 2 18630 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 2 18139
70 % 8 13 1634
50 % 17 54 246
40 % 19 76 198
30 % 30 124 125

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.