Sequence Similarity Clusters for the Entities in PDB 3V58

Entity #1 | Chains: A,C
Phycoerythrin alpha subunit protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 20367
95 % 2 2 19760 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 2 19208
70 % 4 12 81
50 % 4 12 111
40 % 13 55 90
30 % 33 145 16
Entity #2 | Chains: B,D
Phycoerythrin beta subunit protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21980
95 % 2 2 19761 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 2 19209
70 % 8 14 89
50 % 19 63 43
40 % 21 88 35
30 % 34 145 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures