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An Information Portal to 110206 Biological Macromolecular Structures

Crystal Structure of the B-phycoerythrin from the red algae Porphyridium Cruentum at pH8
Sequence Clustering and Redundancy Reduction Results
3V57
Sequence Clusters for the Sequence Entities in PDB 3V57
Entity #1: Chains: A,C - Phycoerythrin alpha subunit protein, length: 164 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 17683
95% 1 2 15400
90% 1 2 15031
70% 1 6 4649
50% 1 6 4409
40% 8 38 305
30% 20 102 131
Entity #2: Chains: B,D - Phycoerythrin beta subunit protein, length: 177 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 17445
95% 1 2 15224
90% 1 2 14859
70% 6 12 1649
50% 13 46 246
40% 13 64 207
30% 21 102 131
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.