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An Information Portal to 108124 Biological Macromolecular Structures

Crystal Structure of the B-phycoerythrin from the red algae Porphyridium Cruentum at pH8
Sequence Clustering and Redundancy Reduction Results
3V57
Sequence Clusters for the Sequence Entities in PDB 3V57
Entity #1: Chains: A,C - Phycoerythrin alpha subunit protein, length: 164 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 17344
95% 1 2 15126
90% 1 2 14760
70% 1 6 4550
50% 1 6 4334
40% 8 37 300
30% 20 98 121
Entity #2: Chains: B,D - Phycoerythrin beta subunit protein, length: 177 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 17109
95% 1 2 14950
90% 1 2 14588
70% 6 12 1617
50% 13 45 242
40% 13 61 203
30% 21 98 121
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.