Sequence Similarity Clusters for the Entities in PDB 3V57

Entity #1 | Chains: A,C
Phycoerythrin alpha subunit protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22164
95 % 1 2 19147 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 2 18645
70 % 3 11 812
50 % 3 11 853
40 % 10 48 253
30 % 24 128 115
Entity #2 | Chains: B,D
Phycoerythrin beta subunit protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21887
95 % 1 2 18942 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 2 18442
70 % 6 13 1657
50 % 15 56 211
40 % 15 78 186
30 % 25 128 115

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.