Sequence Similarity Clusters for the Entities in PDB 3V57

Entity #1 | Chains: A,C
Phycoerythrin alpha subunit protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22450
95 % 1 2 19374 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 2 18863
70 % 3 12 74
50 % 3 12 101
40 % 10 54 61
30 % 24 143 18
Entity #2 | Chains: B,D
Phycoerythrin beta subunit protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22171
95 % 1 2 19166 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 2 18659
70 % 6 14 79
50 % 15 62 38
40 % 15 87 24
30 % 25 143 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures