Sequence Similarity Clusters for the Entities in PDB 3V57

Entity #1 | Chains: A,C
Phycoerythrin alpha subunit protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21775
95 % 1 2 18788 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 2 18297
70 % 1 9 1288
50 % 1 9 1333
40 % 8 46 286
30 % 20 124 125
Entity #2 | Chains: B,D
Phycoerythrin beta subunit protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21502
95 % 1 2 18588 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 2 18098
70 % 6 13 1632
50 % 13 54 246
40 % 13 76 199
30 % 21 124 125

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.