Sequence Similarity Clusters for the Entities in PDB 3V53

Entity #1 | Chains: A,B,C,D,E
RNA-binding protein 25 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16109
95 % 1 1 14972 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 1 14672
70 % 1 1 13729
50 % 1 1 12155
40 % 1 1 11483
30 % 1 1 9429

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures