Sequence Similarity Clusters for the Entities in PDB 3V53

Entity #1 | Chains: A,B,C,D,E
RNA-binding protein 25 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 15950
95 % 1 1 14947 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 1 14676
70 % 1 1 13757
50 % 1 1 12212
40 % 1 1 11072
30 % 1 1 9611

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures