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Crystal structure of HIV-1 reverse transcriptase (RT) with DNA and AZTTP
Sequence Clustering and Redundancy Reduction Results
3V4I
Sequence Clusters for the Sequence Entities in PDB 3V4I
Entity #1: Chains: A,C - HIV-1 Reverse Transcriptase P66 subunit protein, length: 556 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 7 2718
95% 112 202 62
90% 112 202 65
70% 112 202 81
50% 113 203 118
40% 113 203 140
30% 113 203 162
Entity #2: Chains: B,D - HIV-1 Reverse Transcriptase P51 subunit protein, length: 428 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 29 67 252
95% 107 196 69
90% 107 196 73
70% 107 196 90
50% 108 197 120
40% 108 197 146
30% 108 197 173
Entity #3: Chains: E,T - DNA (5'-D(*AP*TP*GP*GP*AP*AP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3') dna, length: 27 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: F,P - DNA (5'-D(*AP*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*(ATM))-3') dna, length: 21 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.