Sequence Similarity Clusters for the Entities in PDB 3V0V

Entity #1 | Chains: B,L
WN1 222-5 Fab (IgG2a) light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27179
95 % 2 2 22627 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.3
PDBFlex
90 % 2 5 10135
70 % 891 2264 1
50 % 1827 4587 1
40 % 1827 4587 1
30 % 2059 5392 1
Entity #2 | Chains: A,H
WN1 222-5 Fab (IgG2a) heavy chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 26927
95 % 2 2 22453 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.8
PDBFlex
90 % 2 2 21773
70 % 883 2222 2
50 % 1828 4587 1
40 % 1828 4587 1
30 % 2060 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.