Sequence Similarity Clusters for the Entities in PDB 3V0V

Entity #1 | Chains: B,L
WN1 222-5 Fab (IgG2a) light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 29102
95 % 2 2 25445 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.3
PDBFlex
90 % 2 5 11140
70 % 1004 2516 1
50 % 2057 5101 1
40 % 2372 5750 1
30 % 2897 7168 1
Entity #2 | Chains: A,H
WN1 222-5 Fab (IgG2a) heavy chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 29101
95 % 2 2 25444 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 2.5
PDBFlex
90 % 2 2 24566
70 % 995 2475 2
50 % 2058 5101 1
40 % 2373 5750 1
30 % 2898 7168 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures