Sequence Similarity Clusters for the Entities in PDB 3V0V

Entity #1 | Chains: B,L
WN1 222-5 Fab (IgG2a) light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27668
95 % 2 2 23058 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.3
PDBFlex
90 % 2 5 10296
70 % 900 2287 1
50 % 1845 4633 1
40 % 1845 4633 1
30 % 2086 5461 1
Entity #2 | Chains: A,H
WN1 222-5 Fab (IgG2a) heavy chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27410
95 % 2 2 22883 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 2 2 22181
70 % 892 2244 2
50 % 1846 4633 1
40 % 1846 4633 1
30 % 2087 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.