Sequence Similarity Clusters for the Entities in PDB 3V0Q

Entity #1 | Chains: A,B
Histo-blood group ABO system transferase protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 20 1526
95 % 84 138 250 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.5
PDBFlex
90 % 84 138 266
70 % 84 138 304
50 % 84 138 363
40 % 87 166 243
30 % 87 166 253

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures