Sequence Similarity Clusters for the Entities in PDB 3UXG

Entity #1 | Chains: A
DNA-binding protein RFXANK protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 68159
95 % 3 3 21468 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 3 3 20811
70 % 3 3 19000
50 % 6 9 6881
40 % 6 9 6361
30 % 111 357 33
Entity #2 | Chains: B
Histone deacetylase 4 protein, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3V30 1 A DNA-binding protein RFXANK UNP residues 90-260 (ANK repeats) 9606
2 3V31 1 A Ankyrin repeat family A protein 2 UNP residues 148-313 (ANK repeats) 9606
3 6MEW 1 A, C DNA-binding protein RFXANK 9606
4 4LG6 1 A Ankyrin repeat family A protein 2 9606
5 3V2X 1 A Ankyrin repeat family A protein 2 UNP residues 148-313 (ANK repeats) 9606
6 3UXG 1 A DNA-binding protein RFXANK UNP residues 90-260 9606
7 3SO8 1 A Ankyrin repeat family A protein 2 UNP residues 149-310 9606
8 3V2O 1 A Ankyrin repeat family A protein 2 UNP residues 148-313 (ANK repeats) 9606
9 4QQI 1 A Ankyrin repeat family A protein 2 UNP residues 142-313 9606