Sequence Similarity Clusters for the Entities in PDB 3USE

Entity #1 | Chains: S,T
Hydrogenase-1 small chain protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 3255
95 % 6 8 2956
90 % 6 8 3003
70 % 6 8 2991
50 % 11 14 2122
40 % 11 14 2132
30 % 11 14 2027
Entity #2 | Chains: L,M
Hydrogenase-1 large chain protein, length: 582 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 3771
95 % 6 9 2529
90 % 6 9 2569
70 % 6 9 2577
50 % 14 20 1258
40 % 35 62 322
30 % 40 75 291

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.