Sequence Similarity Clusters for the Entities in PDB 3USE

Entity #1 | Chains: S,T
Hydrogenase-1 small chain protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 3288
95 % 6 8 2985
90 % 6 8 3033
70 % 6 8 3019
50 % 11 14 2136
40 % 11 14 2147
30 % 11 14 2044
Entity #2 | Chains: L,M
Hydrogenase-1 large chain protein, length: 582 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 3811
95 % 6 9 2554
90 % 6 9 2594
70 % 6 9 2599
50 % 14 20 1265
40 % 35 62 328
30 % 40 75 293

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.