Sequence Similarity Clusters for the Entities in PDB 3USE

Entity #1 | Chains: S,T
Hydrogenase-1 small chain protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 3361
95 % 6 8 3039
90 % 6 8 3086
70 % 6 8 3064
50 % 11 14 2165
40 % 11 14 2171
30 % 11 14 2066
Entity #2 | Chains: L,M
Hydrogenase-1 large chain protein, length: 582 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 3890
95 % 6 9 2609
90 % 6 9 2654
70 % 6 9 2644
50 % 14 20 1288
40 % 35 62 339
30 % 40 75 298

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.