Sequence Similarity Clusters for the Entities in PDB 3USE

Entity #1 | Chains: S,T
Hydrogenase-1 small chain protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 3391
95 % 6 8 3055
90 % 6 8 3103
70 % 6 8 3082
50 % 11 14 2185
40 % 11 14 2183
30 % 11 14 2083
Entity #2 | Chains: L,M
Hydrogenase-1 large chain protein, length: 582 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 3927
95 % 6 9 2625
90 % 6 9 2671
70 % 6 9 2663
50 % 14 20 1302
40 % 35 62 342
30 % 40 75 300

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.