Sequence Similarity Clusters for the Entities in PDB 3UPZ

Entity #1 | Chains: A
Calmodulin-domain protein kinase 1 protein, length: 484 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 28 1936
95 % 21 44 1218 Flexibility: Medium
Max RMSD: 26.5, Avg RMSD: 4.6
PDBFlex
90 % 21 44 1241
70 % 21 50 1031
50 % 26 57 954
40 % 27 58 953
30 % 27 58 954

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures