Sequence Similarity Clusters for the Entities in PDB 3UPZ

Entity #1 | Chains: A
Calmodulin-domain protein kinase 1 protein, length: 484 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 28 1880
95 % 21 44 1186 Flexibility: Medium
Max RMSD: 26.5, Avg RMSD: 4.6
PDBFlex
90 % 21 44 1210
70 % 21 50 1002
50 % 26 57 929
40 % 27 58 931
30 % 27 58 920

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures