Sequence Similarity Clusters for the Entities in PDB 3ULE

Entity #1 | Chains: A
Actin-related protein 3 protein, length: 418 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2442
95 % 3 19 3080 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 3 19 3125
70 % 3 19 3105
50 % 3 20 2789
40 % 3 20 2743
30 % 99 249 40
Entity #2 | Chains: B
Actin-related protein 2 protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 18 2679
95 % 3 19 3087 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 1.1
PDBFlex
90 % 3 19 3133
70 % 3 19 3115
50 % 3 19 3050
40 % 97 229 23
30 % 100 249 40
Entity #3 | Chains: C
Actin-related protein 2/3 complex subunit 1B protein, length: 372 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 10314
95 % 3 19 3098 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 3 19 3143
70 % 3 19 3124
50 % 3 19 3059
40 % 3 20 2750
30 % 3 20 2580
Entity #4 | Chains: D
Actin-related protein 2/3 complex subunit 2 protein, length: 300 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2502
95 % 3 19 3139 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 3 19 3187
70 % 3 19 3165
50 % 3 19 3098
40 % 3 20 2767
30 % 3 20 2594
Entity #5 | Chains: E
Actin-related protein 2/3 complex subunit 3 protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2580
95 % 3 19 3223 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 3 19 3266
70 % 3 19 3230
50 % 3 20 2846
40 % 3 20 2801
30 % 3 20 2630
Entity #6 | Chains: F
Actin-related protein 2/3 complex subunit 4 protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2582
95 % 3 19 3229 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 3 19 3274
70 % 3 19 3236
50 % 3 20 2850
40 % 3 20 2807
30 % 3 20 2634
Entity #7 | Chains: G
Actin-related protein 2/3 complex subunit 5 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 10794
95 % 3 19 3244 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.9
PDBFlex
90 % 3 19 3288
70 % 3 19 3250
50 % 3 19 3166
40 % 3 19 3082
30 % 3 19 2891

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures