Sequence Similarity Clusters for the Entities in PDB 3ULE

Entity #1 | Chains: A
Actin-related protein 3 protein, length: 418 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2920
95 % 3 19 3242 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 3 19 3300
70 % 3 19 3252
50 % 3 20 2926
40 % 3 20 2852
30 % 101 268 41
Entity #2 | Chains: B
Actin-related protein 2 protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2922
95 % 3 19 3244 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 1.2
PDBFlex
90 % 3 19 3301
70 % 3 19 3253
50 % 3 19 3191
40 % 99 248 26
30 % 102 268 41
Entity #3 | Chains: C
Actin-related protein 2/3 complex subunit 1B protein, length: 372 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2921
95 % 3 19 3243 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 3 19 3373
70 % 3 19 3328
50 % 3 19 3250
40 % 3 20 2896
30 % 3 20 2641
Entity #4 | Chains: D
Actin-related protein 2/3 complex subunit 2 protein, length: 300 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2923
95 % 3 19 3245 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 3 19 3302
70 % 3 19 3254
50 % 3 19 3192
40 % 3 20 2853
30 % 3 20 2642
Entity #5 | Chains: E
Actin-related protein 2/3 complex subunit 3 protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 3108
95 % 3 19 3412 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 3 19 3471
70 % 3 19 3417
50 % 3 20 2921
40 % 3 20 2846
30 % 3 20 2634
Entity #6 | Chains: F
Actin-related protein 2/3 complex subunit 4 protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2925
95 % 3 19 3247 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 3 19 3304
70 % 3 19 3256
50 % 3 20 2920
40 % 3 20 2845
30 % 3 20 2633
Entity #7 | Chains: G
Actin-related protein 2/3 complex subunit 5 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2924
95 % 3 19 3246 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 3 19 3303
70 % 3 19 3255
50 % 3 19 3193
40 % 3 19 3107
30 % 3 20 2643

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures