Sequence Similarity Clusters for the Entities in PDB 3ULE

Entity #1 | Chains: A
Actin-related protein 3 protein, length: 418 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2699
95 % 3 20 3023 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 3 20 3084
70 % 3 20 3049
50 % 3 21 2697
40 % 3 21 2648
30 % 105 277 41
Entity #2 | Chains: B
Actin-related protein 2 protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2701
95 % 3 20 3025 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 1.2
PDBFlex
90 % 3 20 3085
70 % 3 20 3050
50 % 3 20 2986
40 % 103 256 26
30 % 106 277 41
Entity #3 | Chains: C
Actin-related protein 2/3 complex subunit 1B protein, length: 372 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2700
95 % 3 20 3024 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 3 20 3129
70 % 3 20 3091
50 % 3 20 3030
40 % 3 21 2692
30 % 3 21 2474
Entity #4 | Chains: D
Actin-related protein 2/3 complex subunit 2 protein, length: 300 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2702
95 % 3 20 3026 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 3 20 3086
70 % 3 20 3051
50 % 3 20 2987
40 % 3 21 2650
30 % 3 21 2476
Entity #5 | Chains: E
Actin-related protein 2/3 complex subunit 3 protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2780
95 % 3 20 3101 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 3 20 3115
70 % 3 20 3080
50 % 3 21 2687
40 % 3 21 2642
30 % 3 21 2470
Entity #6 | Chains: F
Actin-related protein 2/3 complex subunit 4 protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2781
95 % 3 20 3102 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 3 20 3165
70 % 3 20 3126
50 % 3 21 2686
40 % 3 21 2641
30 % 3 21 2469
Entity #7 | Chains: G
Actin-related protein 2/3 complex subunit 5 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2804
95 % 3 20 3134 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 3 20 3189
70 % 3 20 3152
50 % 3 20 3079
40 % 3 20 2991
30 % 3 21 2564

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures