Sequence Similarity Clusters for the Entities in PDB 3ULE

Entity #1 | Chains: A
Actin-related protein 3 protein, length: 418 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2784
95 % 3 20 3114 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 3 20 3174
70 % 3 20 3138
50 % 3 21 2765
40 % 3 21 2703
30 % 105 280 43
Entity #2 | Chains: B
Actin-related protein 2 protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2786
95 % 3 20 3116 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 1.3
PDBFlex
90 % 3 20 3175
70 % 3 20 3139
50 % 3 20 3060
40 % 103 259 27
30 % 106 280 43
Entity #3 | Chains: C
Actin-related protein 2/3 complex subunit 1B protein, length: 372 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2785
95 % 3 20 3115 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.7
PDBFlex
90 % 3 20 3220
70 % 3 20 3178
50 % 3 20 3103
40 % 3 21 2747
30 % 3 21 2515
Entity #4 | Chains: D
Actin-related protein 2/3 complex subunit 2 protein, length: 300 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2787
95 % 3 20 3117 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 3 20 3176
70 % 3 20 3140
50 % 3 20 3061
40 % 3 21 2705
30 % 3 21 2517
Entity #5 | Chains: E
Actin-related protein 2/3 complex subunit 3 protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2866
95 % 3 20 3194 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 3 20 3206
70 % 3 20 3169
50 % 3 21 2755
40 % 3 21 2698
30 % 3 21 2510
Entity #6 | Chains: F
Actin-related protein 2/3 complex subunit 4 protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2867
95 % 3 20 3195 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 3 20 3258
70 % 3 20 3212
50 % 3 21 2754
40 % 3 21 2697
30 % 3 21 2509
Entity #7 | Chains: G
Actin-related protein 2/3 complex subunit 5 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 20 2788
95 % 3 20 3118 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 3 20 3177
70 % 3 20 3141
50 % 3 20 3062
40 % 3 20 2960
30 % 3 21 2518

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures