Sequence Similarity Clusters for the Entities in PDB 3ULE

Entity #1 | Chains: A
Actin-related protein 3 protein, length: 418 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2864
95 % 3 19 3193 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 3 19 3248
70 % 3 19 3184
50 % 3 20 2881
40 % 3 20 2805
30 % 99 262 40
Entity #2 | Chains: B
Actin-related protein 2 protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2865
95 % 3 19 3194 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 1.2
PDBFlex
90 % 3 19 3249
70 % 3 19 3185
50 % 3 19 3130
40 % 97 242 25
30 % 100 262 40
Entity #3 | Chains: C
Actin-related protein 2/3 complex subunit 1B protein, length: 372 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 3051
95 % 3 19 3366 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 3 19 3427
70 % 3 19 3358
50 % 3 19 3276
40 % 3 20 2891
30 % 3 20 2663
Entity #4 | Chains: D
Actin-related protein 2/3 complex subunit 2 protein, length: 300 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2866
95 % 3 19 3195 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 3 19 3250
70 % 3 19 3186
50 % 3 19 3131
40 % 3 20 2806
30 % 3 20 2587
Entity #5 | Chains: E
Actin-related protein 2/3 complex subunit 3 protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 3041
95 % 3 19 3355 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 3 19 3416
70 % 3 19 3350
50 % 3 20 2875
40 % 3 20 2798
30 % 3 20 2580
Entity #6 | Chains: F
Actin-related protein 2/3 complex subunit 4 protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2868
95 % 3 19 3197 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 3 19 3252
70 % 3 19 3188
50 % 3 20 2874
40 % 3 20 2797
30 % 3 20 2579
Entity #7 | Chains: G
Actin-related protein 2/3 complex subunit 5 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2867
95 % 3 19 3196 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 3 19 3251
70 % 3 19 3187
50 % 3 19 3132
40 % 3 19 3052
30 % 3 20 2588

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures