POP-OUT | CLOSE

An Information Portal to 105339 Biological Macromolecular Structures

High resolution structure of DNA/RNA hybrid in complex with RNase H catalytic domain D132N mutant
Sequence Clustering and Redundancy Reduction Results
3ULD
Sequence Clusters for the Sequence Entities in PDB 3ULD
Entity #1: Chains: A - Ribonuclease H protein, length: 142 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 13 1834
95% 6 20 1525
90% 6 20 1561
70% 6 20 1585
50% 6 20 1632
40% 6 20 1659
30% 6 20 1591
Entity #2: Chains: B - RNA (5'-R(*UP*CP*GP*AP*CP*A)-3') rna, length: 6 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - DNA (5'-D(*AP*TP*GP*TP*CP*(PGN))-3') dna, length: 6 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.