Sequence Similarity Clusters for the Entities in PDB 3UL1

Entity #1 | Chains: B
Importin subunit alpha-2 protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 67 531
95 % 7 67 720 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.6
PDBFlex
90 % 9 78 605
70 % 9 78 645
50 % 10 102 444
40 % 11 106 457
30 % 11 106 454
Entity #2 | Chains: A
Nucleoplasmin protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 51141
95 % 1 2 38242 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 2 36482
70 % 1 2 32437
50 % 1 2 27742
40 % 1 2 24552
30 % 1 2 20915

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures