Sequence Similarity Clusters for the Entities in PDB 3UKY

Entity #1 | Chains: B
Importin subunit alpha-2 protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 48 70 552
95 % 48 70 690 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 0.5
PDBFlex
90 % 56 81 574
70 % 56 81 614
50 % 64 105 442
40 % 66 109 462
30 % 66 110 448
Entity #2 | Chains: C
Nuclear cap-binding protein complex subunit 1 protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49931
95 % 1 1 41327
90 % 1 1 39365
70 % 1 1 34800
50 % 1 1 29568
40 % 1 1 25903
30 % 1 1 21587

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures