Sequence Similarity Clusters for the Entities in PDB 3UKU

Entity #1 | Chains: A
ACTIN-LIKE PROTEIN 3 protein, length: 418 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 19 2240
95 % 16 19 2867
90 % 16 19 2914
70 % 16 19 2901
50 % 16 20 2611
40 % 16 20 2583
30 % 152 223 53
Entity #2 | Chains: B
ACTIN-LIKE PROTEIN 2 protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 18 2460
95 % 16 19 2873
90 % 16 19 2921
70 % 16 19 2911
50 % 16 19 2852
40 % 137 203 40
30 % 153 223 53
Entity #3 | Chains: C
Actin-related protein 2/3 complex subunit 1B protein, length: 372 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 9589
95 % 16 19 2884
90 % 16 19 2931
70 % 16 19 2920
50 % 16 19 2862
40 % 16 20 2590
30 % 16 20 2422
Entity #4 | Chains: D
Actin-related protein 2/3 complex subunit 2 protein, length: 300 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 19 2295
95 % 16 19 2924
90 % 16 19 2973
70 % 16 19 2960
50 % 16 19 2899
40 % 16 20 2602
30 % 16 20 2432
Entity #5 | Chains: E
Actin-related protein 2/3 complex subunit 3 protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 19 2369
95 % 16 19 2998
90 % 16 19 3040
70 % 16 19 3018
50 % 16 20 2664
40 % 16 20 2633
30 % 16 20 2461
Entity #6 | Chains: F
Actin-related protein 2/3 complex subunit 4 protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 19 2371
95 % 16 19 3003
90 % 16 19 3046
70 % 16 19 3022
50 % 16 20 2667
40 % 16 20 2638
30 % 16 20 2465
Entity #7 | Chains: G
Actin-related protein 2/3 complex subunit 5 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 10022
95 % 16 19 3015
90 % 16 19 3057
70 % 16 19 3033
50 % 16 19 2959
40 % 16 19 2892
30 % 16 19 2712

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.