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An Information Portal to 105025 Biological Macromolecular Structures

C.Esp1396I bound to its highest affinity operator site OM
Sequence Clustering and Redundancy Reduction Results
3UFD
Sequence Clusters for the Sequence Entities in PDB 3UFD
Entity #1: Chains: A,B,E,F - Regulatory protein protein, length: 82 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 6 2119
95% 11 13 1004
90% 11 13 1022
70% 11 13 1045
50% 11 13 1107
40% 11 13 1131
30% 11 13 1107
Entity #2: Chains: C,G - DNA (5'-D(*AP*TP*GP*TP*AP*GP*AP*CP*TP*AP*TP*AP*GP*TP*CP*GP*AP*CP*A)-3') dna, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: D,H - DNA (5'-D(*TP*TP*GP*TP*CP*GP*AP*CP*TP*AP*TP*AP*GP*TP*CP*TP*AP*CP*A)-3') dna, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.