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C.Esp1396I bound to its highest affinity operator site OM
Sequence Clustering and Redundancy Reduction Results
3UFD
Sequence Clusters for the Sequence Entities in PDB 3UFD
Entity #1: Chains: A,B,E,F - Regulatory protein protein, length: 82 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 14 526
95% 11 21 451
90% 11 21 474
70% 11 21 505
50% 11 21 566
40% 11 21 606
30% 11 21 601
Entity #2: Chains: C,G - DNA (5'-D(*AP*TP*GP*TP*AP*GP*AP*CP*TP*AP*TP*AP*GP*TP*CP*GP*AP*CP*A)-3') dna, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: D,H - DNA (5'-D(*TP*TP*GP*TP*CP*GP*AP*CP*TP*AP*TP*AP*GP*TP*CP*TP*AP*CP*A)-3') dna, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.