Sequence Similarity Clusters for the Entities in PDB 3UBP

Entity #1 | Chains: A
PROTEIN (UREASE GAMMA SUBUNIT) protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 6528
95 % 9 12 5381
90 % 9 12 5384
70 % 14 43 1139
50 % 14 45 941
40 % 14 45 962
30 % 14 45 955
Entity #2 | Chains: B
PROTEIN (UREASE BETA SUBUNIT) protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 12 4715
95 % 9 12 5332
90 % 9 12 5336
70 % 9 12 5232
50 % 9 12 4946
40 % 9 12 4668
30 % 9 12 4213
Entity #3 | Chains: C
PROTEIN (UREASE ALPHA SUBUNIT) protein, length: 570 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 6747
95 % 9 12 4662
90 % 9 12 4683
70 % 9 12 4643
50 % 14 48 790
40 % 14 48 817
30 % 14 48 815

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.