Sequence Similarity Clusters for the Entities in PDB 3UBP

Entity #1 | Chains: A
PROTEIN (UREASE GAMMA SUBUNIT) protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 6177
95 % 8 10 6177
90 % 8 10 6154
70 % 13 41 1124
50 % 13 42 1025
40 % 13 42 1052
30 % 13 42 1031
Entity #2 | Chains: B
PROTEIN (UREASE BETA SUBUNIT) protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 10 5530
95 % 8 10 6113
90 % 8 10 6091
70 % 8 10 5946
50 % 8 10 5543
40 % 8 10 5182
30 % 8 10 4659
Entity #3 | Chains: C
PROTEIN (UREASE ALPHA SUBUNIT) protein, length: 570 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 6379
95 % 8 10 5529
90 % 8 10 5523
70 % 8 10 5405
50 % 13 45 845
40 % 13 45 871
30 % 13 45 862

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.