Sequence Similarity Clusters for the Entities in PDB 3UBP

Entity #1 | Chains: A
PROTEIN (UREASE GAMMA SUBUNIT) protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 6851
95 % 10 13 4770
90 % 10 13 4790
70 % 15 44 1168
50 % 15 46 984
40 % 15 46 1001
30 % 15 46 988
Entity #2 | Chains: B
PROTEIN (UREASE BETA SUBUNIT) protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 13 4010
95 % 10 13 4752
90 % 10 13 4774
70 % 10 13 4710
50 % 10 13 4530
40 % 10 13 4312
30 % 10 13 3953
Entity #3 | Chains: C
PROTEIN (UREASE ALPHA SUBUNIT) protein, length: 570 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 7075
95 % 10 13 4565
90 % 10 13 4574
70 % 10 13 4489
50 % 15 49 825
40 % 15 49 849
30 % 15 49 844

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.