Sequence Similarity Clusters for the Entities in PDB 3UBP

Entity #1 | Chains: A
PROTEIN (UREASE GAMMA SUBUNIT) protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 6605
95 % 9 12 5445
90 % 9 12 5448
70 % 14 43 1147
50 % 14 45 960
40 % 14 45 977
30 % 14 45 967
Entity #2 | Chains: B
PROTEIN (UREASE BETA SUBUNIT) protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 12 4770
95 % 9 12 5393
90 % 9 12 5398
70 % 9 12 5290
50 % 9 12 4993
40 % 9 12 4713
30 % 9 12 4248
Entity #3 | Chains: C
PROTEIN (UREASE ALPHA SUBUNIT) protein, length: 570 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 6822
95 % 9 12 4717
90 % 9 12 4743
70 % 9 12 4698
50 % 14 48 804
40 % 14 48 832
30 % 14 48 827

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.